Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Msh2P43247 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Gm13385-201ENSMUST00000121089 220 ntBASIC13.64□□□□□ -0.23
Msh2P43247 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.64□□□□□ -0.23
Msh2P43247 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.64□□□□□ -0.23
Msh2P43247 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.64□□□□□ -0.23
Msh2P43247 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.64□□□□□ -0.23
Msh2P43247 Gm9797-201ENSMUST00000052902 613 ntBASIC13.64□□□□□ -0.23
Msh2P43247 Gm2423-201ENSMUST00000074863 733 ntBASIC13.64□□□□□ -0.23
Msh2P43247 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.64□□□□□ -0.23
Msh2P43247 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Msh2P43247 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Msh2P43247 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.63□□□□□ -0.23
Msh2P43247 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Gm6912-201ENSMUST00000117218 544 ntBASIC13.63□□□□□ -0.23
Msh2P43247 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.63□□□□□ -0.23
Msh2P43247 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.63□□□□□ -0.23
Msh2P43247 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Msh2P43247 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.63□□□□□ -0.23
Msh2P43247 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.63□□□□□ -0.23
Msh2P43247 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.63□□□□□ -0.23
Msh2P43247 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Msh2P43247 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Msh2P43247 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Msh2P43247 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Msh2P43247 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.62□□□□□ -0.23
Msh2P43247 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.62□□□□□ -0.23
Msh2P43247 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Msh2P43247 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.62□□□□□ -0.23
Msh2P43247 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.62□□□□□ -0.23
Msh2P43247 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Msh2P43247 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Msh2P43247 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.62□□□□□ -0.23
Msh2P43247 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Msh2P43247 Gm22189-201ENSMUST00000103822 86 ntBASIC13.62□□□□□ -0.23
Msh2P43247 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Msh2P43247 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Msh2P43247 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Msh2P43247 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Msh2P43247 Gm5866-201ENSMUST00000177881 973 ntBASIC13.62□□□□□ -0.23
Msh2P43247 Gm6218-201ENSMUST00000219812 628 ntBASIC13.62□□□□□ -0.23
Msh2P43247 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.62□□□□□ -0.23
Msh2P43247 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Msh2P43247 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Msh2P43247 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Msh2P43247 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Msh2P43247 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Msh2P43247 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Msh2P43247 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms