Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Gm12490-201ENSMUST00000120255 560 ntBASIC12.12□□□□□ -0.47
Nkx2-2P42586 Gm12138-201ENSMUST00000122180 951 ntBASIC12.12□□□□□ -0.47
Nkx2-2P42586 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.12□□□□□ -0.47
Nkx2-2P42586 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.12□□□□□ -0.47
Nkx2-2P42586 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nkx2-2P42586 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.11□□□□□ -0.47
Nkx2-2P42586 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Gm8598-201ENSMUST00000221184 836 ntBASIC12.11□□□□□ -0.47
Nkx2-2P42586 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.11□□□□□ -0.47
Nkx2-2P42586 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.11□□□□□ -0.47
Nkx2-2P42586 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-2P42586 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.1□□□□□ -0.47
Nkx2-2P42586 Mir1894-201ENSMUST00000122802 81 ntBASIC12.1□□□□□ -0.47
Nkx2-2P42586 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Gm9002-201ENSMUST00000178437 499 ntBASIC12.1□□□□□ -0.47
Nkx2-2P42586 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms