Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Sox6P40645 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sox6P40645 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.44□□□□□ -0.42
Sox6P40645 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.44□□□□□ -0.42
Sox6P40645 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox6P40645 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.43□□□□□ -0.42
Sox6P40645 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.43□□□□□ -0.42
Sox6P40645 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox6P40645 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Sox6P40645 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Sox6P40645 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox6P40645 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox6P40645 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.43□□□□□ -0.42
Sox6P40645 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Gm14719-201ENSMUST00000121891 340 ntBASIC12.43□□□□□ -0.42
Sox6P40645 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.43□□□□□ -0.42
Sox6P40645 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.43□□□□□ -0.42
Sox6P40645 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox6P40645 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.43□□□□□ -0.42
Sox6P40645 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox6P40645 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox6P40645 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox6P40645 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox6P40645 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox6P40645 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox6P40645 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox6P40645 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Sox6P40645 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox6P40645 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox6P40645 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox6P40645 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.42□□□□□ -0.42
Sox6P40645 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox6P40645 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.42□□□□□ -0.42
Sox6P40645 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.42□□□□□ -0.42
Sox6P40645 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Sox6P40645 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox6P40645 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox6P40645 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox6P40645 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms