Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.12■□□□□ 0.01
Vcam1P29533 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vcam1P29533 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.11■□□□□ 0.01
Vcam1P29533 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Vcam1P29533 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.11■□□□□ 0.01
Vcam1P29533 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Gm44207-201ENSMUST00000204568 1424 ntBASIC15.11■□□□□ 0.01
Vcam1P29533 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vcam1P29533 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.11■□□□□ 0.01
Vcam1P29533 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.11■□□□□ 0.01
Vcam1P29533 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.11■□□□□ 0.01
Vcam1P29533 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.11■□□□□ 0.01
Vcam1P29533 Gm30285-201ENSMUST00000214614 422 ntBASIC15.11■□□□□ 0.01
Vcam1P29533 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.11■□□□□ 0.01
Vcam1P29533 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vcam1P29533 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vcam1P29533 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vcam1P29533 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.11■□□□□ 0.01
Vcam1P29533 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.11■□□□□ 0.01
Vcam1P29533 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vcam1P29533 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.11■□□□□ 0.01
Vcam1P29533 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Vcam1P29533 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vcam1P29533 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.1■□□□□ 0.01
Vcam1P29533 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vcam1P29533 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Gm25214-201ENSMUST00000104573 129 ntBASIC15.1■□□□□ 0.01
Vcam1P29533 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.1■□□□□ 0.01
Vcam1P29533 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.1■□□□□ 0.01
Vcam1P29533 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.1■□□□□ 0.01
Vcam1P29533 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.1■□□□□ 0.01
Vcam1P29533 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Vcam1P29533 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vcam1P29533 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.09■□□□□ 0.01
Vcam1P29533 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Vcam1P29533 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.09■□□□□ 0.01
Vcam1P29533 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.09■□□□□ 0.01
Vcam1P29533 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.09■□□□□ 0.01
Vcam1P29533 Gm14726-201ENSMUST00000120623 896 ntBASIC15.09■□□□□ 0.01
Vcam1P29533 Gm12291-201ENSMUST00000121627 311 ntBASIC15.09■□□□□ 0.01
Vcam1P29533 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.09■□□□□ 0.01
Vcam1P29533 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.09■□□□□ 0.01
Vcam1P29533 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.09■□□□□ 0.01
Vcam1P29533 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms