Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BdnfP21237 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.71□□□□□ -0.37
BdnfP21237 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
BdnfP21237 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
BdnfP21237 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Gm6912-201ENSMUST00000117218 544 ntBASIC12.71□□□□□ -0.37
BdnfP21237 Gm4875-201ENSMUST00000118257 786 ntBASIC12.71□□□□□ -0.37
BdnfP21237 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.71□□□□□ -0.37
BdnfP21237 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.71□□□□□ -0.37
BdnfP21237 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
BdnfP21237 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
BdnfP21237 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BdnfP21237 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BdnfP21237 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BdnfP21237 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BdnfP21237 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.71□□□□□ -0.38
BdnfP21237 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BdnfP21237 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BdnfP21237 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BdnfP21237 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BdnfP21237 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
BdnfP21237 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
BdnfP21237 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
BdnfP21237 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.7□□□□□ -0.38
BdnfP21237 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
BdnfP21237 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.7□□□□□ -0.38
BdnfP21237 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.7□□□□□ -0.38
BdnfP21237 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
BdnfP21237 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.7□□□□□ -0.38
BdnfP21237 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.7□□□□□ -0.38
BdnfP21237 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.7□□□□□ -0.38
BdnfP21237 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.7□□□□□ -0.38
BdnfP21237 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.7□□□□□ -0.38
BdnfP21237 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
BdnfP21237 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
BdnfP21237 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
BdnfP21237 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
BdnfP21237 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.7□□□□□ -0.38
BdnfP21237 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.7□□□□□ -0.38
BdnfP21237 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
BdnfP21237 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
BdnfP21237 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
BdnfP21237 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.69□□□□□ -0.38
BdnfP21237 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
BdnfP21237 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms