Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
P06344 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.8□□□□□ -0.52
P06344 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
P06344 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
P06344 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.8□□□□□ -0.52
P06344 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
P06344 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.8□□□□□ -0.52
P06344 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06344 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
P06344 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
P06344 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P06344 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
P06344 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
P06344 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
P06344 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
P06344 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
P06344 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.79□□□□□ -0.52
P06344 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.79□□□□□ -0.52
P06344 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P06344 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Mir7085-201ENSMUST00000184353 66 ntBASIC11.79□□□□□ -0.52
P06344 Gm29649-201ENSMUST00000185649 419 ntBASIC11.79□□□□□ -0.52
P06344 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.79□□□□□ -0.52
P06344 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.79□□□□□ -0.52
P06344 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
P06344 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
P06344 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P06344 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.79□□□□□ -0.52
P06344 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
P06344 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.79□□□□□ -0.52
P06344 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06344 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
P06344 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.78□□□□□ -0.52
P06344 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.78□□□□□ -0.52
P06344 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
P06344 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.78□□□□□ -0.52
P06344 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
P06344 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
P06344 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.78□□□□□ -0.52
P06344 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms