Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01804 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01804 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01804 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P01804 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01804 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01804 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.42□□□□□ -0.58
P01804 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01804 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01804 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01804 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01804 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01804 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.41□□□□□ -0.58
P01804 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.41□□□□□ -0.58
P01804 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
P01804 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
P01804 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.41□□□□□ -0.58
P01804 Gm4984-201ENSMUST00000115987 360 ntBASIC11.41□□□□□ -0.58
P01804 Gm16202-201ENSMUST00000117532 544 ntBASIC11.41□□□□□ -0.58
P01804 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.41□□□□□ -0.58
P01804 Gm6447-201ENSMUST00000118905 835 ntBASIC11.41□□□□□ -0.58
P01804 Gm11814-201ENSMUST00000119515 929 ntBASIC11.41□□□□□ -0.58
P01804 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.41□□□□□ -0.58
P01804 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
P01804 Gm27839-201ENSMUST00000184242 106 ntBASIC11.41□□□□□ -0.58
P01804 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.41□□□□□ -0.58
P01804 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.41□□□□□ -0.58
P01804 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.41□□□□□ -0.58
P01804 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.41□□□□□ -0.58
P01804 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.41□□□□□ -0.58
P01804 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.41□□□□□ -0.58
P01804 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.41□□□□□ -0.58
P01804 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.41□□□□□ -0.58
P01804 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.41□□□□□ -0.58
P01804 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.41□□□□□ -0.58
P01804 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.41□□□□□ -0.58
P01804 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01804 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
P01804 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.4□□□□□ -0.58
P01804 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P01804 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.4□□□□□ -0.58
P01804 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.4□□□□□ -0.58
P01804 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.4□□□□□ -0.58
P01804 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.4□□□□□ -0.58
P01804 Gm5035-201ENSMUST00000215581 927 ntBASIC11.4□□□□□ -0.58
P01804 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.4□□□□□ -0.58
P01804 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P01804 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
P01804 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
P01804 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P01804 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01804 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms