Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.65□□□□□ -0.22
CopeO89079 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.65□□□□□ -0.22
CopeO89079 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CopeO89079 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
CopeO89079 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CopeO89079 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CopeO89079 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CopeO89079 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
CopeO89079 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Gm14767-201ENSMUST00000121559 586 ntBASIC13.64□□□□□ -0.23
CopeO89079 Gm11594-201ENSMUST00000122313 162 ntBASIC13.64□□□□□ -0.23
CopeO89079 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.64□□□□□ -0.23
CopeO89079 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.64□□□□□ -0.23
CopeO89079 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Gm27430-201ENSMUST00000184585 107 ntBASIC13.64□□□□□ -0.23
CopeO89079 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
CopeO89079 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.64□□□□□ -0.23
CopeO89079 Gm44333-201ENSMUST00000197168 107 ntBASIC13.64□□□□□ -0.23
CopeO89079 Gm19931-201ENSMUST00000198920 368 ntBASIC13.64□□□□□ -0.23
CopeO89079 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.64□□□□□ -0.23
CopeO89079 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CopeO89079 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CopeO89079 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CopeO89079 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.64□□□□□ -0.23
CopeO89079 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CopeO89079 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.63□□□□□ -0.23
CopeO89079 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.63□□□□□ -0.23
CopeO89079 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
CopeO89079 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.63□□□□□ -0.23
CopeO89079 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.63□□□□□ -0.23
CopeO89079 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.63□□□□□ -0.23
CopeO89079 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.63□□□□□ -0.23
CopeO89079 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CopeO89079 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.63□□□□□ -0.23
CopeO89079 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CopeO89079 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.63□□□□□ -0.23
CopeO89079 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CopeO89079 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopeO89079 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopeO89079 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopeO89079 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
CopeO89079 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CopeO89079 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopeO89079 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CopeO89079 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.62□□□□□ -0.23
CopeO89079 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopeO89079 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CopeO89079 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopeO89079 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CopeO89079 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms