Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ClppO88696 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.97□□□□□ -0.33
ClppO88696 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.97□□□□□ -0.33
ClppO88696 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.97□□□□□ -0.33
ClppO88696 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.97□□□□□ -0.33
ClppO88696 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
ClppO88696 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.97□□□□□ -0.33
ClppO88696 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.97□□□□□ -0.33
ClppO88696 Gm11425-201ENSMUST00000119608 498 ntBASIC12.97□□□□□ -0.33
ClppO88696 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Gm45841-201ENSMUST00000207700 164 ntBASIC12.97□□□□□ -0.33
ClppO88696 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ClppO88696 Gm9396-201ENSMUST00000076703 567 ntBASIC12.97□□□□□ -0.33
ClppO88696 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.97□□□□□ -0.33
ClppO88696 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ClppO88696 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.97□□□□□ -0.33
ClppO88696 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.97□□□□□ -0.33
ClppO88696 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ClppO88696 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClppO88696 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClppO88696 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClppO88696 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClppO88696 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.96□□□□□ -0.33
ClppO88696 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClppO88696 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClppO88696 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
ClppO88696 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClppO88696 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClppO88696 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClppO88696 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.96□□□□□ -0.33
ClppO88696 Gm27847-201ENSMUST00000183711 107 ntBASIC12.96□□□□□ -0.33
ClppO88696 Gm27375-201ENSMUST00000183799 107 ntBASIC12.96□□□□□ -0.33
ClppO88696 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.96□□□□□ -0.33
ClppO88696 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.96□□□□□ -0.33
ClppO88696 Gm18473-201ENSMUST00000220543 868 ntBASIC12.96□□□□□ -0.33
ClppO88696 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.96□□□□□ -0.33
ClppO88696 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ClppO88696 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClppO88696 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ClppO88696 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.96□□□□□ -0.33
ClppO88696 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClppO88696 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClppO88696 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
ClppO88696 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClppO88696 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClppO88696 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
ClppO88696 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ClppO88696 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClppO88696 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClppO88696 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ClppO88696 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
ClppO88696 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.95□□□□□ -0.34
ClppO88696 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ClppO88696 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.95□□□□□ -0.34
ClppO88696 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ClppO88696 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms