Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.16□□□□□ -0.46
Alx3O70137 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.16□□□□□ -0.46
Alx3O70137 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Alx3O70137 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Alx3O70137 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Alx3O70137 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.16□□□□□ -0.46
Alx3O70137 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.16□□□□□ -0.46
Alx3O70137 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Alx3O70137 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.16□□□□□ -0.46
Alx3O70137 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Alx3O70137 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Alx3O70137 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Alx3O70137 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.15□□□□□ -0.46
Alx3O70137 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.15□□□□□ -0.46
Alx3O70137 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC12.15□□□□□ -0.46
Alx3O70137 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.15□□□□□ -0.46
Alx3O70137 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Alx3O70137 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.15□□□□□ -0.46
Alx3O70137 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Alx3O70137 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Alx3O70137 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Alx3O70137 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx3O70137 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Alx3O70137 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Alx3O70137 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.14□□□□□ -0.47
Alx3O70137 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.14□□□□□ -0.47
Alx3O70137 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.14□□□□□ -0.47
Alx3O70137 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Gm43435-201ENSMUST00000199996 1438 ntBASIC12.14□□□□□ -0.47
Alx3O70137 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.14□□□□□ -0.47
Alx3O70137 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Alx3O70137 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Alx3O70137 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC12.14□□□□□ -0.47
Alx3O70137 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Alx3O70137 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Alx3O70137 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Alx3O70137 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Alx3O70137 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.14□□□□□ -0.47
Alx3O70137 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Gm28975-201ENSMUST00000186412 686 ntBASIC12.14□□□□□ -0.47
Alx3O70137 Gm28925-201ENSMUST00000188586 168 ntBASIC12.14□□□□□ -0.47
Alx3O70137 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Alx3O70137 Gm18905-201ENSMUST00000205454 928 ntBASIC12.14□□□□□ -0.47
Alx3O70137 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms