Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Itgb3O54890 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Itgb3O54890 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Itgb3O54890 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Itgb3O54890 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.01□□□□□ -0.17
Itgb3O54890 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.01□□□□□ -0.17
Itgb3O54890 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Itgb3O54890 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Itgb3O54890 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Itgb3O54890 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Itgb3O54890 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.01□□□□□ -0.17
Itgb3O54890 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Itgb3O54890 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Itgb3O54890 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.01□□□□□ -0.17
Itgb3O54890 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.01□□□□□ -0.17
Itgb3O54890 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Itgb3O54890 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Itgb3O54890 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.01□□□□□ -0.17
Itgb3O54890 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.01□□□□□ -0.17
Itgb3O54890 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Itgb3O54890 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.01□□□□□ -0.17
Itgb3O54890 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Itgb3O54890 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Gm38049-201ENSMUST00000195698 1372 ntBASIC14□□□□□ -0.17
Itgb3O54890 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Itgb3O54890 Gm12742-201ENSMUST00000117326 410 ntBASIC14□□□□□ -0.17
Itgb3O54890 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14□□□□□ -0.17
Itgb3O54890 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14□□□□□ -0.17
Itgb3O54890 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14□□□□□ -0.17
Itgb3O54890 AC125350.2-201ENSMUST00000224737 727 ntBASIC14□□□□□ -0.17
Itgb3O54890 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14□□□□□ -0.17
Itgb3O54890 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14□□□□□ -0.17
Itgb3O54890 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Itgb3O54890 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.99□□□□□ -0.17
Itgb3O54890 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Itgb3O54890 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Gm11978-201ENSMUST00000122315 466 ntBASIC13.99□□□□□ -0.17
Itgb3O54890 Gm7029-201ENSMUST00000173226 450 ntBASIC13.99□□□□□ -0.17
Itgb3O54890 Gm6458-201ENSMUST00000211573 635 ntBASIC13.99□□□□□ -0.17
Itgb3O54890 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Itgb3O54890 Gm10268-201ENSMUST00000085340 555 ntBASIC13.99□□□□□ -0.17
Itgb3O54890 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Itgb3O54890 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms