Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.38□□□□□ -0.27
ChkaO54804 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ChkaO54804 Syt7-204ENSMUST00000223586 1344 ntBASIC13.38□□□□□ -0.27
ChkaO54804 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ChkaO54804 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ChkaO54804 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.37□□□□□ -0.27
ChkaO54804 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ChkaO54804 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ChkaO54804 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ChkaO54804 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.37□□□□□ -0.27
ChkaO54804 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ChkaO54804 Gm7730-201ENSMUST00000212486 454 ntBASIC13.37□□□□□ -0.27
ChkaO54804 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ChkaO54804 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ChkaO54804 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.36□□□□□ -0.27
ChkaO54804 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.36□□□□□ -0.27
ChkaO54804 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.36□□□□□ -0.27
ChkaO54804 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
ChkaO54804 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.36□□□□□ -0.27
ChkaO54804 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.36□□□□□ -0.27
ChkaO54804 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.36□□□□□ -0.27
ChkaO54804 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.36□□□□□ -0.27
ChkaO54804 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ChkaO54804 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ChkaO54804 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ChkaO54804 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ChkaO54804 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
ChkaO54804 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ChkaO54804 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.35□□□□□ -0.27
ChkaO54804 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ChkaO54804 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ChkaO54804 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ChkaO54804 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ChkaO54804 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms