Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.81□□□□□ -0.52
Alx4O35137 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Alx4O35137 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.81□□□□□ -0.52
Alx4O35137 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Alx4O35137 Gm27680-201ENSMUST00000184192 160 ntBASIC11.81□□□□□ -0.52
Alx4O35137 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Alx4O35137 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.81□□□□□ -0.52
Alx4O35137 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.81□□□□□ -0.52
Alx4O35137 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Alx4O35137 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Alx4O35137 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Alx4O35137 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Alx4O35137 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Alx4O35137 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Alx4O35137 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Alx4O35137 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Alx4O35137 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Alx4O35137 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.8□□□□□ -0.52
Alx4O35137 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Alx4O35137 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Alx4O35137 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.8□□□□□ -0.52
Alx4O35137 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Alx4O35137 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.8□□□□□ -0.52
Alx4O35137 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.8□□□□□ -0.52
Alx4O35137 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Gm44344-201ENSMUST00000200287 129 ntBASIC11.8□□□□□ -0.52
Alx4O35137 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.8□□□□□ -0.52
Alx4O35137 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.8□□□□□ -0.52
Alx4O35137 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Gm5867-201ENSMUST00000063197 592 ntBASIC11.8□□□□□ -0.52
Alx4O35137 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.8□□□□□ -0.52
Alx4O35137 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.8□□□□□ -0.52
Alx4O35137 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.8□□□□□ -0.52
Alx4O35137 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Alx4O35137 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.8□□□□□ -0.52
Alx4O35137 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Alx4O35137 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Alx4O35137 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Alx4O35137 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.79□□□□□ -0.52
Alx4O35137 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Gm14767-201ENSMUST00000121559 586 ntBASIC11.79□□□□□ -0.52
Alx4O35137 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.79□□□□□ -0.52
Alx4O35137 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Alx4O35137 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms