Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.24□□□□□ -0.13
Usp35M0QWN7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp35M0QWN7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Usp35M0QWN7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Snora78-201ENSMUST00000158630 128 ntBASIC14.23□□□□□ -0.13
Usp35M0QWN7 Gm29649-201ENSMUST00000185649 419 ntBASIC14.23□□□□□ -0.13
Usp35M0QWN7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Gm10012-201ENSMUST00000078252 192 ntBASIC14.23□□□□□ -0.13
Usp35M0QWN7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.23□□□□□ -0.13
Usp35M0QWN7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp35M0QWN7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Usp35M0QWN7 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.23□□□□□ -0.13
Usp35M0QWN7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.22□□□□□ -0.13
Usp35M0QWN7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp35M0QWN7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Gm24447-201ENSMUST00000083977 338 ntBASIC14.22□□□□□ -0.13
Usp35M0QWN7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.22□□□□□ -0.13
Usp35M0QWN7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp35M0QWN7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp35M0QWN7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms