Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Gm12015-201ENSMUST00000117065 843 ntBASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Gm7851-201ENSMUST00000117574 323 ntBASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Gm22138-201ENSMUST00000158748 128 ntBASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Mir7686-201ENSMUST00000200604 57 ntBASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Gm45856-201ENSMUST00000212752 416 ntBASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Gm9996-201ENSMUST00000070359 913 ntBASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc188F6WEU2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Gm13492-201ENSMUST00000119772 665 ntBASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Gm45120-201ENSMUST00000208880 408 ntBASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Gm2517-201ENSMUST00000215651 348 ntBASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc188F6WEU2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Gm5616-201ENSMUST00000165252 384 ntBASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Gm8741-201ENSMUST00000174736 384 ntBASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Gm45925-201ENSMUST00000218882 744 ntBASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Gm6722-201ENSMUST00000221586 390 ntBASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc188F6WEU2 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms