Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.28□□□□□ -0.28
Gm28043E0CXC2 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gm28043E0CXC2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm28043E0CXC2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm28043E0CXC2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm28043E0CXC2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm28043E0CXC2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Gm28043E0CXC2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm28043E0CXC2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm28043E0CXC2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gm28043E0CXC2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gm28043E0CXC2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Gm28043E0CXC2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gm28043E0CXC2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.27□□□□□ -0.28
Gm28043E0CXC2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Gm24694-201ENSMUST00000180054 110 ntBASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Gm27663-201ENSMUST00000184839 110 ntBASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm28043E0CXC2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Gm14057-201ENSMUST00000120631 482 ntBASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Gm13385-201ENSMUST00000121089 220 ntBASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Gm8927-201ENSMUST00000181978 981 ntBASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Gm29667-201ENSMUST00000190817 490 ntBASIC13.26□□□□□ -0.29
Gm28043E0CXC2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm28043E0CXC2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms