Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.16□□□□□ -0.62
Col6a4A2AX52 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.16□□□□□ -0.62
Col6a4A2AX52 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Col6a4A2AX52 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.15□□□□□ -0.62
Col6a4A2AX52 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Gm14277-201ENSMUST00000121195 360 ntBASIC11.15□□□□□ -0.62
Col6a4A2AX52 Gm14017-201ENSMUST00000121934 386 ntBASIC11.15□□□□□ -0.62
Col6a4A2AX52 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Gm27023-201ENSMUST00000182372 285 ntBASIC11.15□□□□□ -0.62
Col6a4A2AX52 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.15□□□□□ -0.62
Col6a4A2AX52 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.15□□□□□ -0.62
Col6a4A2AX52 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Gm11637-201ENSMUST00000120601 592 ntBASIC11.15□□□□□ -0.62
Col6a4A2AX52 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Gm26956-201ENSMUST00000182176 986 ntBASIC11.15□□□□□ -0.62
Col6a4A2AX52 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.15□□□□□ -0.62
Col6a4A2AX52 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.15□□□□□ -0.62
Col6a4A2AX52 Gm19163-201ENSMUST00000223313 780 ntBASIC11.15□□□□□ -0.62
Col6a4A2AX52 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Col6a4A2AX52 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Col6a4A2AX52 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Col6a4A2AX52 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col6a4A2AX52 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.15□□□□□ -0.63
Col6a4A2AX52 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.15□□□□□ -0.63
Col6a4A2AX52 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col6a4A2AX52 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Col6a4A2AX52 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Col6a4A2AX52 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.14□□□□□ -0.63
Col6a4A2AX52 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Gm7809-201ENSMUST00000153199 742 ntBASIC11.14□□□□□ -0.63
Col6a4A2AX52 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.14□□□□□ -0.63
Col6a4A2AX52 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.14□□□□□ -0.63
Col6a4A2AX52 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.14□□□□□ -0.63
Col6a4A2AX52 Gm12502-201ENSMUST00000120197 444 ntBASIC11.14□□□□□ -0.63
Col6a4A2AX52 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms