Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Gm15371-201ENSMUST00000117057 784 ntBASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Prpf40aQ9R1C7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Gm38223-201ENSMUST00000194484 695 ntBASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.59□□□□□ -0.07
Prpf40aQ9R1C7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf40aQ9R1C7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf40aQ9R1C7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf40aQ9R1C7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf40aQ9R1C7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf40aQ9R1C7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf40aQ9R1C7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf40aQ9R1C7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Prpf40aQ9R1C7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Prpf40aQ9R1C7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Prpf40aQ9R1C7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms