Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.72■□□□□ 0.11
Ube3bQ9ES34 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Ube3bQ9ES34 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Ube3bQ9ES34 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3bQ9ES34 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube3bQ9ES34 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Gm22018-201ENSMUST00000104357 131 ntBASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ube3bQ9ES34 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ube3bQ9ES34 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.71■□□□□ 0.1
Ube3bQ9ES34 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ube3bQ9ES34 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ube3bQ9ES34 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ube3bQ9ES34 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ube3bQ9ES34 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ube3bQ9ES34 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.7■□□□□ 0.1
Ube3bQ9ES34 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Gm42693-201ENSMUST00000196779 631 ntBASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Gm19184-201ENSMUST00000196798 928 ntBASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ube3bQ9ES34 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Gm18054-201ENSMUST00000207539 555 ntBASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.69■□□□□ 0.1
Ube3bQ9ES34 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube3bQ9ES34 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms