Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Mir1982-201ENSMUST00000157368 74 ntBASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Gm21156-201ENSMUST00000189693 869 ntBASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Gm7287-201ENSMUST00000205267 602 ntBASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Gm44882-201ENSMUST00000205702 802 ntBASIC12.44□□□□□ -0.42
Rtp4Q9ER80 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.44□□□□□ -0.42
Rtp4Q9ER80 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.44□□□□□ -0.42
Rtp4Q9ER80 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.44□□□□□ -0.42
Rtp4Q9ER80 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Gm8652-201ENSMUST00000181363 964 ntBASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rtp4Q9ER80 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Gm27486-201ENSMUST00000184923 80 ntBASIC12.42□□□□□ -0.42
Rtp4Q9ER80 AY702102-202ENSMUST00000194651 1173 ntBASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rtp4Q9ER80 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms