Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rrp8Q9DB85 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rrp8Q9DB85 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.96□□□□□ -0.34
Rrp8Q9DB85 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rrp8Q9DB85 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rrp8Q9DB85 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rrp8Q9DB85 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rrp8Q9DB85 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rrp8Q9DB85 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rrp8Q9DB85 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rrp8Q9DB85 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Gm10434-201ENSMUST00000101158 471 ntBASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Gm2383-201ENSMUST00000181461 807 ntBASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Gm28693-202ENSMUST00000190758 331 ntBASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp8Q9DB85 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Gm11222-201ENSMUST00000119005 738 ntBASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Gm18753-201ENSMUST00000201000 566 ntBASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Morn2-202ENSMUST00000227729 656 ntBASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rrp8Q9DB85 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 Gm11964-201ENSMUST00000120982 444 ntBASIC12.93□□□□□ -0.34
Rrp8Q9DB85 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rrp8Q9DB85 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms