Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chaf1bQ9D0N7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Gm25287-201ENSMUST00000103846 110 ntBASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Gm22918-201ENSMUST00000103855 110 ntBASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Gm25911-201ENSMUST00000157621 56 ntBASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms