Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Hdhd3Q9CYW4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hdhd3Q9CYW4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Hdhd3Q9CYW4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hdhd3Q9CYW4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hdhd3Q9CYW4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Hdhd3Q9CYW4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Hdhd3Q9CYW4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hdhd3Q9CYW4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hdhd3Q9CYW4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hdhd3Q9CYW4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hdhd3Q9CYW4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hdhd3Q9CYW4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Gm5566-201ENSMUST00000116118 459 ntBASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Gm9824-201ENSMUST00000178707 561 ntBASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Gm33320-201ENSMUST00000192232 530 ntBASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hdhd3Q9CYW4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Gm18889-201ENSMUST00000174284 929 ntBASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Hdhd3Q9CYW4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hdhd3Q9CYW4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hdhd3Q9CYW4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hdhd3Q9CYW4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms