Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.15□□□□□ -0.3
Ssu72Q9CY97 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssu72Q9CY97 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ssu72Q9CY97 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Gm43703-201ENSMUST00000200523 763 ntBASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssu72Q9CY97 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Gm8410-201ENSMUST00000117225 605 ntBASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Gm5264-201ENSMUST00000190584 848 ntBASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ssu72Q9CY97 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms