Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.59■□□□□ 0.09
Smc3Q9CW03 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Gm27306-201ENSMUST00000183970 107 ntBASIC15.59■□□□□ 0.09
Smc3Q9CW03 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc3Q9CW03 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
Smc3Q9CW03 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smc3Q9CW03 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smc3Q9CW03 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smc3Q9CW03 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smc3Q9CW03 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smc3Q9CW03 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
Smc3Q9CW03 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Smc3Q9CW03 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.58■□□□□ 0.08
Smc3Q9CW03 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.58■□□□□ 0.08
Smc3Q9CW03 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smc3Q9CW03 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.57■□□□□ 0.08
Smc3Q9CW03 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.57■□□□□ 0.08
Smc3Q9CW03 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Gm43094-201ENSMUST00000196549 921 ntBASIC15.57■□□□□ 0.08
Smc3Q9CW03 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.57■□□□□ 0.08
Smc3Q9CW03 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smc3Q9CW03 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.57■□□□□ 0.08
Smc3Q9CW03 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Smc3Q9CW03 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc3Q9CW03 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms