Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh15Q99PJ1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Mir1901-201ENSMUST00000122616 78 ntBASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Gm34023-201ENSMUST00000195539 217 ntBASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Gm45398-201ENSMUST00000210561 165 ntBASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Gm9358-201ENSMUST00000183067 927 ntBASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Snora73b-201ENSMUST00000083419 205 ntBASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh15Q99PJ1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Gm4482-201ENSMUST00000200876 742 ntBASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Gm807-202ENSMUST00000224929 408 ntBASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Pcdh15Q99PJ1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Gm11989-201ENSMUST00000117240 672 ntBASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Gm11362-201ENSMUST00000118838 850 ntBASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Gm15573-201ENSMUST00000119487 540 ntBASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Gm3028-201ENSMUST00000213805 1119 ntBASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Pcdh15Q99PJ1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms