Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Snora73a-201ENSMUST00000082453 205 ntBASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sf3b1Q99NB9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Gm42627-201ENSMUST00000197347 224 ntBASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3b1Q99NB9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Sf3b1Q99NB9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Gm43133-201ENSMUST00000197472 463 ntBASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Gm43118-201ENSMUST00000199149 775 ntBASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3b1Q99NB9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms