Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkd1Q99MH6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkd1Q99MH6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkd1Q99MH6 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkd1Q99MH6 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.52□□□□□ -0.41
Nkd1Q99MH6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.52□□□□□ -0.41
Nkd1Q99MH6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Nkd1Q99MH6 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.52□□□□□ -0.41
Nkd1Q99MH6 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nkd1Q99MH6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.52□□□□□ -0.41
Nkd1Q99MH6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.51□□□□□ -0.41
Nkd1Q99MH6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkd1Q99MH6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Gm4875-201ENSMUST00000118257 786 ntBASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkd1Q99MH6 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.49□□□□□ -0.41
Nkd1Q99MH6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms