Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Gm5161-201ENSMUST00000075243 853 ntBASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdk5rap3Q99LM2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Gm9522-201ENSMUST00000182394 926 ntBASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cdk5rap3Q99LM2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk5rap3Q99LM2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Gm12485-201ENSMUST00000119641 291 ntBASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Gm27306-201ENSMUST00000183970 107 ntBASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms