Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdhb2Q91Y00 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb2Q91Y00 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdhb2Q91Y00 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb2Q91Y00 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Gm13829-201ENSMUST00000119600 138 ntBASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb2Q91Y00 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Mir874-201ENSMUST00000104769 76 ntBASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Gm8213-201ENSMUST00000118191 441 ntBASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhb2Q91Y00 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb2Q91Y00 Gm21156-201ENSMUST00000189693 869 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms