Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vsx1Q91V10 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vsx1Q91V10 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.08□□□□□ -0.31
Vsx1Q91V10 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vsx1Q91V10 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vsx1Q91V10 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vsx1Q91V10 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Gm15782-201ENSMUST00000121073 445 ntBASIC13.08□□□□□ -0.32
Vsx1Q91V10 Gm14017-201ENSMUST00000121934 386 ntBASIC13.08□□□□□ -0.32
Vsx1Q91V10 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Gm29787-201ENSMUST00000222129 849 ntBASIC13.08□□□□□ -0.32
Vsx1Q91V10 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.08□□□□□ -0.32
Vsx1Q91V10 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vsx1Q91V10 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Gm11964-201ENSMUST00000120982 444 ntBASIC13.07□□□□□ -0.32
Vsx1Q91V10 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Gm8584-201ENSMUST00000171982 758 ntBASIC13.07□□□□□ -0.32
Vsx1Q91V10 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Gm2260-201ENSMUST00000184965 657 ntBASIC13.07□□□□□ -0.32
Vsx1Q91V10 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.07□□□□□ -0.32
Vsx1Q91V10 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Morn2-202ENSMUST00000227729 656 ntBASIC13.07□□□□□ -0.32
Vsx1Q91V10 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vsx1Q91V10 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms