Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm22065-201ENSMUST00000103753 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm22066-201ENSMUST00000103761 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm24932-201ENSMUST00000103763 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm24115-201ENSMUST00000103799 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm22190-201ENSMUST00000103827 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm22191-201ENSMUST00000103831 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm24721-201ENSMUST00000103849 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm28018-201ENSMUST00000103869 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm26399-201ENSMUST00000103937 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm11779-201ENSMUST00000118541 368 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm25349-201ENSMUST00000177728 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm23616-201ENSMUST00000177797 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm25871-201ENSMUST00000177816 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm24752-201ENSMUST00000178240 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm24496-201ENSMUST00000178287 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm25649-201ENSMUST00000178476 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm25548-201ENSMUST00000178681 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm23147-201ENSMUST00000178841 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm26095-201ENSMUST00000179270 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm22171-201ENSMUST00000179283 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm23936-201ENSMUST00000179354 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm22619-201ENSMUST00000179516 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm25255-201ENSMUST00000179579 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm24755-201ENSMUST00000179691 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm26506-201ENSMUST00000179692 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm25086-201ENSMUST00000179931 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm23243-201ENSMUST00000180047 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm24659-201ENSMUST00000180212 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm24169-201ENSMUST00000180244 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm23689-201ENSMUST00000180354 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm27359-201ENSMUST00000184153 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm27785-201ENSMUST00000184268 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm27466-201ENSMUST00000184396 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm27703-201ENSMUST00000184836 110 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm19931-201ENSMUST00000198920 368 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Shd-206ENSMUST00000225145 998 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nup35Q8R4R6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup35Q8R4R6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms