Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Syt7-204ENSMUST00000223586 1344 ntBASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Mir7023-201ENSMUST00000185093 64 ntBASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Gm5867-201ENSMUST00000063197 592 ntBASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cchcr1Q8K2I2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cchcr1Q8K2I2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Gm29608-201ENSMUST00000190444 463 ntBASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Gm42550-201ENSMUST00000201553 960 ntBASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cchcr1Q8K2I2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cchcr1Q8K2I2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms