Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smc5Q8CG46 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.38■□□□□ 0.21
Smc5Q8CG46 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.38■□□□□ 0.21
Smc5Q8CG46 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smc5Q8CG46 Gm45743-201ENSMUST00000212701 2795 ntBASIC16.38■□□□□ 0.21
Smc5Q8CG46 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smc5Q8CG46 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smc5Q8CG46 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.36■□□□□ 0.21
Smc5Q8CG46 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.36■□□□□ 0.21
Smc5Q8CG46 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Smc5Q8CG46 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smc5Q8CG46 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Gm15487-201ENSMUST00000122373 465 ntBASIC16.35■□□□□ 0.21
Smc5Q8CG46 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Smc5Q8CG46 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms