Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Gm43134-201ENSMUST00000199434 1886 ntBASIC17.27■□□□□ 0.35
Rsph6aQ8CDR2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Gm29396-201ENSMUST00000185659 716 ntBASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 n-R5s77-201ENSMUST00000083757 119 ntBASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rsph6aQ8CDR2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Gm38297-201ENSMUST00000195122 1057 ntBASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Gm43084-201ENSMUST00000200696 947 ntBASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Cts7-204ENSMUST00000225321 1257 ntBASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Gm43339-201ENSMUST00000200032 1606 ntBASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rsph6aQ8CDR2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Gm17208-201ENSMUST00000168388 535 ntBASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Gm18935-201ENSMUST00000212692 664 ntBASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 AC166051.1-201ENSMUST00000214313 210 ntBASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Gm8227-201ENSMUST00000223306 571 ntBASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 AC154757.2-201ENSMUST00000228885 743 ntBASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rsph6aQ8CDR2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Gm22121-201ENSMUST00000175148 54 ntBASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC17.23■□□□□ 0.35
Rsph6aQ8CDR2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms