Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Gm45668-201ENSMUST00000211271 493 ntBASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf3Q8C120 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Gm14928-201ENSMUST00000120198 477 ntBASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Gm38144-201ENSMUST00000192790 465 ntBASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Gm15823-201ENSMUST00000064305 670 ntBASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf3Q8C120 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Gm23984-201ENSMUST00000157139 203 ntBASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Gm38223-201ENSMUST00000194484 695 ntBASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Gm26315-201ENSMUST00000083890 321 ntBASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf3Q8C120 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms