Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Gm16379-201ENSMUST00000161469 348 ntBASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Gm6222-202ENSMUST00000182143 629 ntBASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Gm27501-201ENSMUST00000183599 107 ntBASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Gm8762-201ENSMUST00000193486 339 ntBASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Gm6458-201ENSMUST00000211573 635 ntBASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh3rf2Q8BZT2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm27516-201ENSMUST00000184237 98 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Mir8109-201ENSMUST00000184375 117 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm45930-201ENSMUST00000221330 292 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gm19163-201ENSMUST00000223313 780 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh3rf2Q8BZT2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms