Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nup54Q8BTS4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Gm14127-201ENSMUST00000117906 678 ntBASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Gm11425-201ENSMUST00000119608 498 ntBASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Gm4271-201ENSMUST00000174444 973 ntBASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Gm9396-201ENSMUST00000076703 567 ntBASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Nup54Q8BTS4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nup54Q8BTS4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms