Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Gm27989-201ENSMUST00000184721 107 ntBASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.82□□□□□ -0.36
Cpne3Q8BT60 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Gm20445-201ENSMUST00000061905 565 ntBASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpne3Q8BT60 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Gm12151-201ENSMUST00000121374 290 ntBASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpne3Q8BT60 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms