Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.7□□□□□ -0.22
Trim62Q80V85 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trim62Q80V85 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trim62Q80V85 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim62Q80V85 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim62Q80V85 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.69□□□□□ -0.22
Trim62Q80V85 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.69□□□□□ -0.22
Trim62Q80V85 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim62Q80V85 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim62Q80V85 Gm11978-201ENSMUST00000122315 466 ntBASIC13.69□□□□□ -0.22
Trim62Q80V85 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim62Q80V85 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.69□□□□□ -0.22
Trim62Q80V85 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Gm22331-201ENSMUST00000158066 136 ntBASIC13.69□□□□□ -0.22
Trim62Q80V85 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.69□□□□□ -0.22
Trim62Q80V85 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim62Q80V85 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim62Q80V85 Gm7561-201ENSMUST00000211203 886 ntBASIC13.69□□□□□ -0.22
Trim62Q80V85 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.69□□□□□ -0.22
Trim62Q80V85 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim62Q80V85 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim62Q80V85 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim62Q80V85 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.69□□□□□ -0.22
Trim62Q80V85 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.69□□□□□ -0.22
Trim62Q80V85 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim62Q80V85 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim62Q80V85 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim62Q80V85 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim62Q80V85 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trim62Q80V85 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim62Q80V85 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trim62Q80V85 Gm12203-201ENSMUST00000118235 598 ntBASIC13.68□□□□□ -0.22
Trim62Q80V85 Gm12209-201ENSMUST00000120089 596 ntBASIC13.68□□□□□ -0.22
Trim62Q80V85 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim62Q80V85 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim62Q80V85 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim62Q80V85 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Gm5186-201ENSMUST00000218781 920 ntBASIC13.68□□□□□ -0.22
Trim62Q80V85 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Gm6091-201ENSMUST00000098307 165 ntBASIC13.68□□□□□ -0.22
Trim62Q80V85 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trim62Q80V85 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.68□□□□□ -0.22
Trim62Q80V85 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim62Q80V85 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.68□□□□□ -0.22
Trim62Q80V85 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim62Q80V85 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim62Q80V85 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms