Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm25668-201ENSMUST00000157700 129 ntBASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Gm45865-201ENSMUST00000211815 945 ntBASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Gm18041-201ENSMUST00000218210 618 ntBASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf38bQ80SY5 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm24514-201ENSMUST00000174961 285 ntBASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm43094-201ENSMUST00000196549 921 ntBASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 AU022133-201ENSMUST00000200601 873 ntBASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm18473-201ENSMUST00000220543 868 ntBASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prpf38bQ80SY5 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.9□□□□□ -0.19
Prpf38bQ80SY5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Olfr284-202ENSMUST00000206647 966 ntBASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Gm25007-201ENSMUST00000083808 133 ntBASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prpf38bQ80SY5 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prpf38bQ80SY5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms