Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CtifQ6PEE2 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC14.1□□□□□ -0.15
CtifQ6PEE2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CtifQ6PEE2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Gm9385-201ENSMUST00000117563 472 ntBASIC14.1□□□□□ -0.15
CtifQ6PEE2 Gm7862-201ENSMUST00000121461 292 ntBASIC14.1□□□□□ -0.15
CtifQ6PEE2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Gm27301-201ENSMUST00000184012 127 ntBASIC14.1□□□□□ -0.15
CtifQ6PEE2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.1□□□□□ -0.15
CtifQ6PEE2 AA619741-201ENSMUST00000195095 646 ntBASIC14.1□□□□□ -0.15
CtifQ6PEE2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.1□□□□□ -0.15
CtifQ6PEE2 Thap2-203ENSMUST00000218989 527 ntBASIC14.1□□□□□ -0.15
CtifQ6PEE2 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.1□□□□□ -0.15
CtifQ6PEE2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.1□□□□□ -0.15
CtifQ6PEE2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CtifQ6PEE2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CtifQ6PEE2 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.1□□□□□ -0.15
CtifQ6PEE2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.09□□□□□ -0.15
CtifQ6PEE2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.09□□□□□ -0.15
CtifQ6PEE2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.09□□□□□ -0.15
CtifQ6PEE2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.09□□□□□ -0.15
CtifQ6PEE2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CtifQ6PEE2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC14.08□□□□□ -0.15
CtifQ6PEE2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CtifQ6PEE2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CtifQ6PEE2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CtifQ6PEE2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
CtifQ6PEE2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CtifQ6PEE2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CtifQ6PEE2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CtifQ6PEE2 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.08□□□□□ -0.16
CtifQ6PEE2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CtifQ6PEE2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms