Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Gm38294-201ENSMUST00000192831 381 ntBASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smarcd3Q6P9Z1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Gm17837-201ENSMUST00000186435 985 ntBASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.16□□□□□ -0.46
Smarcd3Q6P9Z1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Smarcd3Q6P9Z1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms