Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Gm15370-201ENSMUST00000117158 253 ntBASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Gm17208-201ENSMUST00000168388 535 ntBASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Gm24526-201ENSMUST00000082921 158 ntBASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smchd1Q6P5D8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Gm25043-201ENSMUST00000158604 212 ntBASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smchd1Q6P5D8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Gm3961-201ENSMUST00000204425 994 ntBASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms