Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Gm42550-201ENSMUST00000201553 960 ntBASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sp140Q6NSQ5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sp140Q6NSQ5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Sp140Q6NSQ5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sp140Q6NSQ5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sp140Q6NSQ5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sp140Q6NSQ5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sp140Q6NSQ5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sp140Q6NSQ5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sp140Q6NSQ5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Sp140Q6NSQ5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sp140Q6NSQ5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sp140Q6NSQ5 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Mir874-201ENSMUST00000104769 76 ntBASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sp140Q6NSQ5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Gm28631-201ENSMUST00000190740 334 ntBASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Gm19220-201ENSMUST00000222682 803 ntBASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Gm26315-201ENSMUST00000083890 321 ntBASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sp140Q6NSQ5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sp140Q6NSQ5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms