Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Gm17330-201ENSMUST00000221047 165 ntBASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Gm5161-201ENSMUST00000075243 853 ntBASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ParpbpQ6IRT3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ParpbpQ6IRT3 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.46□□□□□ -0.42
ParpbpQ6IRT3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ParpbpQ6IRT3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ParpbpQ6IRT3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ParpbpQ6IRT3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ParpbpQ6IRT3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
ParpbpQ6IRT3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ParpbpQ6IRT3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ParpbpQ6IRT3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ParpbpQ6IRT3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ParpbpQ6IRT3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ParpbpQ6IRT3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Gm12091-201ENSMUST00000146791 830 ntBASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Gm23984-201ENSMUST00000157139 203 ntBASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ParpbpQ6IRT3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ParpbpQ6IRT3 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.44□□□□□ -0.42
ParpbpQ6IRT3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.44□□□□□ -0.42
ParpbpQ6IRT3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ParpbpQ6IRT3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
ParpbpQ6IRT3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms