Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
AtmQ62388 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.23□□□□□ -0.45
AtmQ62388 Gm15711-201ENSMUST00000118889 535 ntBASIC12.23□□□□□ -0.45
AtmQ62388 Gm12266-201ENSMUST00000120311 962 ntBASIC12.23□□□□□ -0.45
AtmQ62388 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.23□□□□□ -0.45
AtmQ62388 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.23□□□□□ -0.45
AtmQ62388 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
AtmQ62388 Snora73b-201ENSMUST00000083419 205 ntBASIC12.23□□□□□ -0.45
AtmQ62388 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
AtmQ62388 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
AtmQ62388 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.22□□□□□ -0.45
AtmQ62388 Gm13937-201ENSMUST00000121000 988 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.22□□□□□ -0.45
AtmQ62388 Gm29615-201ENSMUST00000185371 697 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm28224-201ENSMUST00000186078 697 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm29001-201ENSMUST00000186177 697 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm28292-201ENSMUST00000186593 697 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm28101-201ENSMUST00000187608 697 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm29076-201ENSMUST00000187689 697 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm28302-201ENSMUST00000187931 697 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm28646-201ENSMUST00000188220 697 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm28205-201ENSMUST00000189177 697 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm29032-201ENSMUST00000189797 697 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm28695-201ENSMUST00000190300 697 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Gm37448-201ENSMUST00000192795 697 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.22□□□□□ -0.45
AtmQ62388 Gm43778-201ENSMUST00000199438 199 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.22□□□□□ -0.45
AtmQ62388 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
AtmQ62388 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
AtmQ62388 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.22□□□□□ -0.45
AtmQ62388 Gm12948-201ENSMUST00000119406 682 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.22□□□□□ -0.45
AtmQ62388 Gm24845-201ENSMUST00000158034 109 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.22□□□□□ -0.45
AtmQ62388 Gm43610-201ENSMUST00000199117 365 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.22□□□□□ -0.45
AtmQ62388 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.22□□□□□ -0.45
AtmQ62388 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.22□□□□□ -0.45
AtmQ62388 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
AtmQ62388 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.22□□□□□ -0.45
AtmQ62388 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 Gm22138-201ENSMUST00000158748 128 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
AtmQ62388 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.22□□□□□ -0.45
AtmQ62388 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.22□□□□□ -0.45
AtmQ62388 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.22□□□□□ -0.45
AtmQ62388 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
AtmQ62388 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.21□□□□□ -0.45
AtmQ62388 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.21□□□□□ -0.45
AtmQ62388 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.21□□□□□ -0.45
AtmQ62388 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.21□□□□□ -0.45
AtmQ62388 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
AtmQ62388 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.21□□□□□ -0.45
AtmQ62388 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
AtmQ62388 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.21□□□□□ -0.45
AtmQ62388 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms