Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Tmed9-203ENSMUST00000224741 1450 ntBASIC17.38■□□□□ 0.37
Gli3Q61602 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gli3Q61602 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gli3Q61602 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gli3Q61602 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gli3Q61602 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC17.37■□□□□ 0.37
Gli3Q61602 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gli3Q61602 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC17.37■□□□□ 0.37
Gli3Q61602 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC17.37■□□□□ 0.37
Gli3Q61602 Gm18460-201ENSMUST00000208088 464 ntBASIC17.37■□□□□ 0.37
Gli3Q61602 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Gli3Q61602 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC17.37■□□□□ 0.37
Gli3Q61602 Gm40879-201ENSMUST00000220759 612 ntBASIC17.37■□□□□ 0.37
Gli3Q61602 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gli3Q61602 Mir339-201ENSMUST00000083659 96 ntBASIC17.37■□□□□ 0.37
Gli3Q61602 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gli3Q61602 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gli3Q61602 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gli3Q61602 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gli3Q61602 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gli3Q61602 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Gli3Q61602 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.37■□□□□ 0.37
Gli3Q61602 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gli3Q61602 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gli3Q61602 Gm24891-201ENSMUST00000104391 136 ntBASIC17.36■□□□□ 0.37
Gli3Q61602 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC17.36■□□□□ 0.37
Gli3Q61602 Gm14724-201ENSMUST00000118400 537 ntBASIC17.36■□□□□ 0.37
Gli3Q61602 Gm11422-201ENSMUST00000118925 1103 ntBASIC17.36■□□□□ 0.37
Gli3Q61602 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC17.36■□□□□ 0.37
Gli3Q61602 Ighv1-48-201ENSMUST00000191795 294 ntBASIC17.36■□□□□ 0.37
Gli3Q61602 Gm14005-208ENSMUST00000223654 681 ntBASIC17.36■□□□□ 0.37
Gli3Q61602 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gli3Q61602 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gli3Q61602 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Gli3Q61602 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Gm23045-201ENSMUST00000175041 96 ntBASIC17.36■□□□□ 0.37
Gli3Q61602 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Gli3Q61602 Gm17877-201ENSMUST00000192578 814 ntBASIC17.36■□□□□ 0.37
Gli3Q61602 Gm43186-201ENSMUST00000198130 824 ntBASIC17.36■□□□□ 0.37
Gli3Q61602 Gm5298-201ENSMUST00000201122 892 ntBASIC17.36■□□□□ 0.37
Gli3Q61602 Gm5340-201ENSMUST00000203733 880 ntBASIC17.36■□□□□ 0.37
Gli3Q61602 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC17.36■□□□□ 0.37
Gli3Q61602 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC17.36■□□□□ 0.37
Gli3Q61602 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC17.36■□□□□ 0.37
Gli3Q61602 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC17.36■□□□□ 0.37
Gli3Q61602 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC17.36■□□□□ 0.37
Gli3Q61602 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Gm6430-201ENSMUST00000054664 1248 ntBASIC17.36■□□□□ 0.37
Gli3Q61602 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gli3Q61602 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gli3Q61602 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Gli3Q61602 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gli3Q61602 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Gli3Q61602 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Gm6630-201ENSMUST00000119199 454 ntBASIC17.35■□□□□ 0.37
Gli3Q61602 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC17.35■□□□□ 0.37
Gli3Q61602 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Gm2965-201ENSMUST00000198365 343 ntBASIC17.35■□□□□ 0.37
Gli3Q61602 Gm44953-201ENSMUST00000208745 1286 ntBASIC17.35■□□□□ 0.37
Gli3Q61602 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 AC153962.2-201ENSMUST00000219417 550 ntBASIC17.35■□□□□ 0.37
Gli3Q61602 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC17.35■□□□□ 0.37
Gli3Q61602 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gli3Q61602 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Gli3Q61602 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC17.34■□□□□ 0.37
Gli3Q61602 Gm11956-201ENSMUST00000119525 512 ntBASIC17.34■□□□□ 0.37
Gli3Q61602 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Gli3Q61602 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Gli3Q61602 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gli3Q61602 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Gli3Q61602 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC17.34■□□□□ 0.37
Gli3Q61602 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms