Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.04□□□□□ -0.48
Usf1Q61069 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Usf1Q61069 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Usf1Q61069 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.04□□□□□ -0.48
Usf1Q61069 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.04□□□□□ -0.48
Usf1Q61069 Gm15276-201ENSMUST00000145953 498 ntBASIC12.04□□□□□ -0.48
Usf1Q61069 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Usf1Q61069 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.04□□□□□ -0.48
Usf1Q61069 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.04□□□□□ -0.48
Usf1Q61069 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.04□□□□□ -0.48
Usf1Q61069 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Usf1Q61069 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.04□□□□□ -0.48
Usf1Q61069 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.04□□□□□ -0.48
Usf1Q61069 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Usf1Q61069 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Usf1Q61069 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Usf1Q61069 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.03□□□□□ -0.48
Usf1Q61069 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.03□□□□□ -0.48
Usf1Q61069 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Gm12566-201ENSMUST00000121479 359 ntBASIC12.03□□□□□ -0.48
Usf1Q61069 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.03□□□□□ -0.48
Usf1Q61069 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usf1Q61069 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.03□□□□□ -0.48
Usf1Q61069 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Usf1Q61069 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.03□□□□□ -0.48
Usf1Q61069 Gm38317-201ENSMUST00000195564 343 ntBASIC12.03□□□□□ -0.48
Usf1Q61069 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usf1Q61069 Gm6458-201ENSMUST00000211573 635 ntBASIC12.03□□□□□ -0.48
Usf1Q61069 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.03□□□□□ -0.48
Usf1Q61069 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.03□□□□□ -0.48
Usf1Q61069 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.03□□□□□ -0.48
Usf1Q61069 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.03□□□□□ -0.48
Usf1Q61069 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Usf1Q61069 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.03□□□□□ -0.48
Usf1Q61069 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Usf1Q61069 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usf1Q61069 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Usf1Q61069 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Usf1Q61069 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Usf1Q61069 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usf1Q61069 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usf1Q61069 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usf1Q61069 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Usf1Q61069 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usf1Q61069 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usf1Q61069 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usf1Q61069 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usf1Q61069 Gm23270-201ENSMUST00000104055 131 ntBASIC12.02□□□□□ -0.49
Usf1Q61069 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usf1Q61069 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usf1Q61069 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.02□□□□□ -0.49
Usf1Q61069 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.02□□□□□ -0.49
Usf1Q61069 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.02□□□□□ -0.49
Usf1Q61069 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.02□□□□□ -0.49
Usf1Q61069 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.02□□□□□ -0.49
Usf1Q61069 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.02□□□□□ -0.49
Usf1Q61069 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usf1Q61069 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms