Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm43433-201ENSMUST00000196573 481 ntBASIC12.74□□□□□ -0.37
ClpbQ60649 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.74□□□□□ -0.37
ClpbQ60649 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.74□□□□□ -0.37
ClpbQ60649 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.74□□□□□ -0.37
ClpbQ60649 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ClpbQ60649 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ClpbQ60649 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ClpbQ60649 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
ClpbQ60649 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ClpbQ60649 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ClpbQ60649 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ClpbQ60649 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ClpbQ60649 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ClpbQ60649 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.73□□□□□ -0.37
ClpbQ60649 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.73□□□□□ -0.37
ClpbQ60649 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.73□□□□□ -0.37
ClpbQ60649 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
ClpbQ60649 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
ClpbQ60649 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Gm15770-201ENSMUST00000117498 584 ntBASIC12.73□□□□□ -0.37
ClpbQ60649 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.73□□□□□ -0.37
ClpbQ60649 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ClpbQ60649 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.73□□□□□ -0.37
ClpbQ60649 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.73□□□□□ -0.37
ClpbQ60649 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
ClpbQ60649 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ClpbQ60649 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.73□□□□□ -0.37
ClpbQ60649 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.73□□□□□ -0.37
ClpbQ60649 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ClpbQ60649 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.73□□□□□ -0.37
ClpbQ60649 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ClpbQ60649 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.72□□□□□ -0.37
ClpbQ60649 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.72□□□□□ -0.37
ClpbQ60649 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.72□□□□□ -0.37
ClpbQ60649 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
ClpbQ60649 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.72□□□□□ -0.37
ClpbQ60649 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.72□□□□□ -0.37
ClpbQ60649 Gm14127-201ENSMUST00000117906 678 ntBASIC12.72□□□□□ -0.37
ClpbQ60649 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.72□□□□□ -0.37
ClpbQ60649 Gm15429-201ENSMUST00000151268 798 ntBASIC12.72□□□□□ -0.37
ClpbQ60649 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Gm5356-201ENSMUST00000093326 615 ntBASIC12.72□□□□□ -0.37
ClpbQ60649 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClpbQ60649 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms